Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929535.1_cds_XP_016476813.1_68606
CDS Infomation

[gene=LOC107798349] [db_xref=GeneID:107798349] [protein=transcription factor ICE1-like] [protein_id=XP_016476813.1] [location=join(34432..35553,37228..37464,37708..37878,38572..38655)] [gbkey=CDS]
Sequence

ATGTTGTCTCATAGTATGGGTTGGATGGATGGTAAAGAAGATGAAGAAACTGGTACTTGG
GTTCATCAAAATAACAATGAAAATAATCATAACAACAACAACAGAGATGAAATGGAGATG
GGTGCACTTTCTACATTCAAATCTATGCTTGATGCTGAAGATGTAGACTGGTACAACATG
GCTACTAACAACAACAATCACAACAACAACAGTGTTGGTGCCATGCAATTTGGTTCTAAT
TTTACTGAAGCTGAAAACAATTTGCTTTTACAGCCAGTTGATTCATCATCTTCTTGTTCA
CCATCTTCTGCTTTTAACAATCTTGACCCTTCTCAGGTTCACTTTTTCTTGCCCCAAAAA
TCCACTATTCCACCTTTGCTTAGTGCTTTAAACAACCCATTGGAGAATGGTTTTGATTTG
GGTTGTGGTGAAAAGGGGTTTCTTGAAACTCATCAAAATTTGAGTGTTTTGAATAAAACT
GGGATGTTTACTGGTGGGTTTCAAGATTTGAGCTCTCAAAACCAAATGGGGCATAATAAT
TTGAGTTCTTTCACTCAATTCCCTTGTACCAATTTGCTACAAATGCCTCAAACTAGTTCT
GGTTTTGGTCCATTGGTTGGGTTTGGGGACAATTCTGCTCATGACAACTCTTTGTTTTTG
AATAGGTCTAAGTTATTAAAACCTCTTGATAATTTTGCTTCAATTGGAGCACAACCTACA
CTTTTCCAAAAGAGGGCTGCACTTAGGAAAAACTTGGCTAATAATAGTAGTGGAAATTTG
GGGATTTTGGGGAATGAAATTGGTCAGACTTCAAGCAATAAAGAAGTGAATGAAATGAAT
GAAAGGAAGAGGAAATGTAGTAGTAATTTGGATGAACTTGAAGATGTGAGTCTAGATGGA
TCTACATTGAATTATGATTCTGATGACCTTATTGAAAAGGTAGAGGATAGTGTTAAAAAT
GGTGGAAATAGCTCAAATGCAACTAGTACTGTTACTGGTGTGGATCAGAAAGGGAAAAAG
AAAGGACTTCCGGCTAAGAATCTGATGGCTGAACGCCGCCGTAGGAAGAAACTCAATGAT
AGGCTTTACATGCTGAGATCTGTTGTTCCAAAGATTAGTAAGATGGACAGGGCTTCAATC
TTAGGAGATGCAATTGAGTACCTAAAGGAGCTTCTACAGAAAATCAATGACCTGCATAAC
GAACTCGAGTCAACACCACCTGGCTCTTCATTGACTCCGGCAACAAGCTTCTACCCTTTA
ACGCCAACTGCAACAGCTCTACCCGGCCGAATCAAGGAAGAACTTTGTCCAAGTTCATTT
GCAAGCCCTCTGTCTAGCCCTACTGGTCAACCTCCAAGGGTTGAAGTAAGGGCAAGAGAA
GGAAGAGCGGTGAATATCCATATGTTTTGCAGCCGCAGACCAGGCCTTTTACTCTCAACA
ATGAGGGCTCTGGACAATCTTGGACTGGACATTCAACAGGCTGTTATCAGCTGCTTCAAT
GGGTTTGCCTTGGATATCTTCCGAGCTGAGCAATCCAAAGAAGGTCAAGACATCCATCCA
GAACAAATTAAGGCAGTGTTGCTGGACTCTGCTGGCTTCCATGGGATGATATAA

Peptide Sequence

PEP ID

XP_016476813.1
PEP Infomation

PREDICTED: transcription factor ICE1-like [Nicotiana tabacum]
Sequence

MLSHSMGWMDGKEDEETGTWVHQNNNENNHNNNNRDEMEMGALSTFKSMLDAEDVDWYNM
ATNNNNHNNNSVGAMQFGSNFTEAENNLLLQPVDSSSSCSPSSAFNNLDPSQVHFFLPQK
STIPPLLSALNNPLENGFDLGCGEKGFLETHQNLSVLNKTGMFTGGFQDLSSQNQMGHNN
LSSFTQFPCTNLLQMPQTSSGFGPLVGFGDNSAHDNSLFLNRSKLLKPLDNFASIGAQPT
LFQKRAALRKNLANNSSGNLGILGNEIGQTSSNKEVNEMNERKRKCSSNLDELEDVSLDG
STLNYDSDDLIEKVEDSVKNGGNSSNATSTVTGVDQKGKKKGLPAKNLMAERRRRKKLND
RLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLHNELESTPPGSSLTPATSFYPL
TPTATALPGRIKEELCPSSFASPLSSPTGQPPRVEVRAREGRAVNIHMFCSRRPGLLLST
MRALDNLGLDIQQAVISCFNGFALDIFRAEQSKEGQDIHPEQIKAVLLDSAGFHGMI

Transcript Sequence

Gene sequence data has not been registered.